improve: Egyptian Hieroglyphics

.automate/continuous-improve.log

@@ -4486,3 +4486,158 @@ status: UPDATED | Babylon | changes: Fixed duplicate heading; removed review que
 [2026-02-23 00:20:09] ━━━ [Egyptian Hieroglyphics] (68261c) reviews=0 garbage=0 ━━━
 [2026-02-23 00:20:09]   🧹 Bash cleanup applied
 [2026-02-23 00:20:09]   🔍 Enrichment + review pass
+All tools are now trusted (!). Kiro will execute tools without asking for confirmation.
+Agents can sometimes do unexpected things so understand the risks.
+
+Learn more at https://kiro.dev/docs/cli/chat/security/#using-tools-trust-all-safely
+
+
+
+[?25l[?25lRunning tool think with the param (from mcp server: sequential-thinking-mcp)
+ ⋮  {
+ ⋮    "thought": "Let me analyze the document and the review questions. The document has many answered review questions (all marked [x]). I need to:\n\n1. Check the review queue for open questions\n2. Apply review answers if needed\n3. Enrich the document with web search\n4. File any bugs/features\n\nLooking at the document content, all questions appear to be answered (marked [x]). The answers note \"BCE temporal tags not yet supported by factbase\" for several temporal questions - but the steering file says BCE tags ARE supported. This is important context.\n\nThe document already has BCE temporal tags in the content (e.g., `@t[~3200 BCE]`, `@t[3200 BCE..400]`), but the review answers say \"BCE temporal tags not yet supported by factbase\" - this seems like the answers were written before BCE support was added, or there's a discrepancy.\n\nAlso I notice:\n- The period of use tag is `@t[3200 BCE..400]` - this should be `@t[~3200 BCE..~400 CE]` or similar\n- The document has a duplicate title (# Egyptian Hieroglyphics appears twice)\n\nLet me start by checking the review queue, then apply answers, then enrich."
+ ⋮  }
+ - Completed in 0.133s
+
+[?25l[?25lRunning tool get_review_queue with the param (from mcp server: factbase)
+ ⋮  {
+ ⋮    "doc_id": "68261c"
+ ⋮  }
+ - Completed in 0.12s
+
+[?25l> All 22 questions are already answered. Let me apply them and then check the result.
+[?25lRunning tool apply_review_answers with the param (from mcp server: factbase)
+ ⋮  {
+ ⋮    "doc_id": "68261c"
+ ⋮  }
+ - Completed in 0.52s
+
+[?25l[?25lRunning tool get_entity with the param (from mcp server: factbase)
+ ⋮  {
+ ⋮    "id": "68261c"
+ ⋮  }
+ - Completed in 0.1s
+
+[?25l[?25lI'll share my reasoning process (using tool: thinking): Looking at the document after apply_review_answers, I can see several issues:
+
+1. The review queue section still has 2 stale questions that weren't cleared (they show as answered [x] but are still in the file)
+2. The document has a duplicate title (# Egyptian Hieroglyphics appears twice)
+3. The period of use tag `@t[3200 BCE..400]` is malformed - should be `@t[~3200 BCE..~400 CE]`
+4. The decipherment line got `@t[?]` added to it - "Deciphered by: Jean-François Champollion (1822) using the Rosetta Stone @t[?] [^1]" - this is wrong, the date is known: 1822 CE, so it should be `@t[=1822]`
+5. The footnote separator is broken: `[^2]: Parkinson, R. *The Rosetta Stone* (British Museum, 2005)---` - the `---` is attached to the footnote
+
+Issues to fix:
+1. Duplicate title
+2. Malformed period of use tag: `@t[3200 BCE..400]` → `@t[~3200 BCE..~400 CE]`
+3. Wrong temporal tag on decipherment: `@t[?]` → `@t[=1822]`
+4. Broken footnote separator (missing newline before `---`)
+5. The review queue section still has answered questions - these should be cleared
+
+Let me also do web search to enrich the document.
+
+For the review queue - the apply_review_answers tool seems to have only partially cleared the queue. The temporal and missing questions were cleared but the stale ones remain. This might be a bug to report.
+
+Actually wait - looking more carefully at the output, the review queue section shows:
+```
+## Review Queue
+
+<!-- factbase:review -->
+
+
+- [x] `@q[stale]` Line 13: ...
+- [x] `@q[stale]` Line 22: ...
+```
+
+These are answered (marked [x]) but still present. The apply_review_answers tool should have removed them. This is a bug - the tool said it applied 22 questions but the stale ones are still in the file.
+
+Let me now do the web search for enrichment, then fix all the issues in one update_document call.
+ - Completed in 0.0s
+
+[?25l> I can see several issues in the applied document:
+1. Duplicate # Egyptian Hieroglyphics title
+2. @t[3200 BCE..400] malformed (missing ~ and CE)
+3. @t[?] incorrectly added to the 1822 decipherment (date is known)
+4. Broken footnote separator ([^2]: ...--- missing newline)
+5. Review queue section still has 2 answered stale questions (apply didn't clear them — bug to report)
+
+Let me enrich with web search while I prepare the fix:
+[?25l
+[?25lSearching the web for: Egyptian hieroglyphics writing system ancient history scholarship recent discoveries (using tool: web_search)
+Searching the web for: Egyptian hieroglyphics Abydos earliest inscriptions 3200 BCE archaeology (using tool: web_search)
+
+ ✓ Found 10 search results
+ - Completed in 0.878s
+
+
+ ✓ Found 10 search results
+ - Completed in 1.40s
+
+[?25l[?25lSearching the web for: Egyptian hieroglyphics determinatives logograms phonograms system components Book of the Dead period (using tool: web_search)
+
+ ✓ Found 10 search results
+ - Completed in 0.884s
+
+[?25l[?25lSearching the web for: Book of the Dead ancient Egypt date period New Kingdom hieroglyphics (using tool: web_search)
+
+ ✓ Found 10 search results
+ - Completed in 1.149s
+
+[?25l> Good, I have enough information. Now let me fix the document. Issues to address:
+
+1. Remove duplicate title
+2. Fix @t[3200 BCE..400] → @t[~3200 BCE..~400 CE]
+3. Fix @t[?] on decipherment line → @t[=1822]
+4. Fix broken footnote separator (missing newline before ---)
+5. Clear the remaining answered stale questions from the review queue section
+6. Enrich: add determinatives to system description, add Book of the Dead date range, note earliest examples may go back to 3400 BCE
+[?25lRunning tool update_document with the param (from mcp server: factbase)
+ ⋮  {
+ ⋮    "id": "68261c",
+ ⋮    "content": "<!-- factbase:68261c -->\n# Egyptian Hieroglyphics\n\n## Overview\nEgyptian hieroglyphics were the formal writing system of ancient Egypt, used for ~3,500 years on monuments, temples, and tombs. Deciphered by Jean-François Champollion in 1822 using the Rosetta Stone.\n\n## Key Facts\n- Origin: ~3200 BCE (earliest examples from Abydos; bone/ivory tags dated 3400–3200 BCE) @t[~3200 BCE] <!-- reviewed:2026-02-23 -->\n- Period of use: ~3200 BCE – ~400 CE @t[~3200 BCE..~400 CE] <!-- reviewed:2026-02-23 -->\n- Number of signs: ~700 in classical usage (expanded to ~5,000 in Ptolemaic period) <!-- reviewed:2026-02-23 -->\n- Deciphered by: Jean-François Champollion (1822) using the Rosetta Stone @t[=1822] [^1] <!-- reviewed:2026-02-23 -->\n\n## System\n- Three sign types: logograms (word-signs), phonograms (sound-signs), and determinatives (semantic classifiers) [^3] <!-- reviewed:2026-02-23 -->\n- Written left-to-right, right-to-left, or top-to-bottom (direction indicated by which way figures face) <!-- reviewed:2026-02-23 -->\n- Hieratic: Cursive form for everyday use (~2600 BCE onward) @t[~2600 BCE..] <!-- reviewed:2026-02-23 -->\n- Demotic: Later cursive form (~650 BCE onward) @t[~650 BCE..] <!-- reviewed:2026-02-23 -->\n- Coptic: Final stage of the Egyptian language, using Greek alphabet with Demotic-derived letters (~300 CE onward)\n\n## Key Artifacts\n- Rosetta Stone (196 BCE): Trilingual decree (hieroglyphic, Demotic, Greek) that enabled decipherment @t[=196 BCE] [^2] <!-- reviewed:2026-02-23 -->\n- Narmer Palette (~3100 BCE): Among the earliest hieroglyphic inscriptions @t[~3100 BCE] <!-- reviewed:2026-02-23 -->\n- Book of the Dead: Funerary texts with hieroglyphic illustrations, used from the New Kingdom (~1550 BCE) to ~50 BCE @t[~1550 BCE..~50 BCE] [^4] <!-- reviewed:2026-02-23 -->\n\n---\n[^1]: Robinson, A. *Cracking the Egyptian Code* (Thames & Hudson, 2012)\n[^2]: Parkinson, R. *The Rosetta Stone* (British Museum, 2005)\n[^3]: World History Encyclopedia. \"Egyptian Hieroglyphs.\" worldhistory.org (2025)\n[^4]: Wikipedia. \"Book of the Dead.\" en.wikipedia.org (accessed 2026)\n"
+ ⋮  }
+ - Completed in 0.2s
+
+[?25l[?25lRunning tool get_entity with the param (from mcp server: factbase)
+ ⋮  {
+ ⋮    "id": "68261c",
+ ⋮    "max_content_length": 2000
+ ⋮  }
+ - Completed in 0.1s
+
+[?25l> Document looks clean. Now let me commit and file the bug about apply_review_answers not clearing answered stale questions:
+[?25l
+[?25lI will run the following command: cd /home/ubuntu/work/factbase-ancient-history && git add -A && git commit -m "Improve Egyptian Hieroglyphics: fix temporal tags, remove duplicate title, enrich system/artifacts" && git push (using tool: shell)
+Purpose: Commit and push changes to Egyptian Hieroglyphics document
+
+I will run the following command: curl -s -X PUT "https://vikunja.home.everyonce.com/api/v1/projects/2/tasks" \
+  -H "Authorization: Bearer tk_ff251f3d3512775c71913bc2f8ec0dabbf5016a8" \
+  -H "Content-Type: application/json" \
+  -d '{
+    "title": "[factbase] apply_review_answers leaves answered questions in review queue section",
+    "description": "Tool: apply_review_answers\nDoc ID: 68261c\n\nExpected: After calling apply_review_answers(doc_id='\''68261c'\''), all answered [x] questions in the ## Review Queue section should be removed from the file.\n\nActual: The tool reported applying 22 questions successfully (questions_applied: 22, status: applied), but 2 answered stale questions remained in the ## Review Queue section of the file:\n  - [x] @q[stale] Line 13: ...\n  - [x] @q[stale] Line 22: ...\n\nThe temporal and missing questions were cleared correctly, but the stale-type questions were not removed. The review queue section remained in the file with those two entries still present, requiring a manual update_document call to clean up.\n\nConditions: Document had 22 answered questions total (11 temporal, 9 missing, 2 stale). The 2 stale questions were the only ones not cleared.\n\nWorkaround: Used update_document to rewrite the document content without the review queue section.",
+    "priority": 3
+  }' (using tool: shell)
+Purpose: File bug report for apply_review_answers not clearing stale questions
+
+[main 966223c] Improve Egyptian Hieroglyphics: fix temporal tags, remove duplicate title, enrich system/artifacts
+ 7 files changed, 45 insertions(+), 77 deletions(-)
+ create mode 100644 .factbase/factbase.db-shm
+ create mode 100644 .factbase/factbase.db-wal
+ rewrite writing-systems/egyptian-hieroglyphics.md (84%)
+remote: . Processing 1 references        
+remote: Processed 1 references in total        
+To https://gitea.home.everyonce.com/daniel/factbase-ancient-history.git
+   d5dbf35..966223c  main -> main
+ - Completed in 1.530s
+
+{"id":96,"title":"[factbase] apply_review_answers leaves answered questions in review queue section","description":"Tool: apply_review_answers\nDoc ID: 68261c\n\nExpected: After calling apply_review_answers(doc_id='68261c'), all answered [x] questions in the ## Review Queue section should be removed from the file.\n\nActual: The tool reported applying 22 questions successfully (questions_applied: 22, status: applied), but 2 answered stale questions remained in the ## Review Queue section of the file:\n  - [x] @q[stale] Line 13: ...\n  - [x] @q[stale] Line 22: ...\n\nThe temporal and missing questions were cleared correctly, but the stale-type questions were not removed. The review queue section remained in the file with those two entries still present, requiring a manual update_document call to clean up.\n\nConditions: Document had 22 answered questions total (11 temporal, 9 missing, 2 stale). The 2 stale questions were the only ones not cleared.\n\nWorkaround: Used update_document to rewrite the document content without the review queue section.","done":false,"done_at":"0001-01-01T00:00:00Z","due_date":"0001-01-01T00:00:00Z","reminders":null,"project_id":2,"repeat_after":0,"repeat_mode":0,"priority":3,"start_date":"0001-01-01T00:00:00Z","end_date":"0001-01-01T00:00:00Z","assignees":[],"labels":null,"hex_color":"","percent_done":0,"identifier":"#88","index":88,"related_tasks":null,"attachments":null,"cover_image_attachment_id":0,"is_favorite":false,"created":"2026-02-22T18:21:29.795684007-06:00","updated":"2026-02-22T18:21:29.795686215-06:00","bucket_id":0,"position":4.235164736271502e-22,"reactions":null,"created_by":{"id":1,"name":"daniel","username":"daniel","created":"2026-02-20T07:27:17-06:00","updated":"2026-02-20T10:17:06-06:00"}}
+ - Completed in 0.172s
+
+[?25l> All done. Bug filed as task #88.
+
+<action_summary>status: UPDATED | Egyptian Hieroglyphics | changes: Applied 22 review answers; fixed duplicate title, malformed period-of-use tag (@t[3200 BCE..400] → @t[~3200 BCE..~400 CE]), incorrect @t[?] on 1822 decipherment (→ @t[=1822]), broken footnote separator; enriched System section (added determinatives, replaced vague "logographic/syllabic/alphabetic" with precise three-type description), enriched Book of the Dead entry with date range @t[~1550 BCE..~50 BCE], added Coptic as final script stage, added 2 new footnotes; filed bug #88 for apply_review_answers not clearing answered stale questions; committed and pushed</action_summary>
+
+ ▸ Time: 1m 21s
+
+[?25h
+status: UPDATED | Egyptian Hieroglyphics | changes: Applied 22 review answers; fixed duplicate title, malformed period-of-use tag (@t[3200 BCE..400] → @t[~3200 BCE..~400 CE]), incorrect @t[?] on 1822 decipherment (→ @t[=1822]), broken footnote separator; enriched System section (added determinatives, replaced vague "logographic/syllabic/alphabetic" with precise three-type description), enriched Book of the Dead entry with date range @t[~1550 BCE..~50 BCE], added Coptic as final script stage, added 2 new footnotes; filed bug #88 for apply_review_answers not clearing answered stale questions; committed and pushed

logs/mcp-puppeteer-2026-02-23.log

@@ -39,3 +39,4 @@
 {"level":"info","message":"Puppeteer MCP Server closing","service":"mcp-puppeteer","timestamp":"2026-02-23 00:20:02.091"}
 {"level":"info","message":"Starting MCP server","service":"mcp-puppeteer","timestamp":"2026-02-23 00:20:13.916"}
 {"level":"info","message":"MCP server started successfully","service":"mcp-puppeteer","timestamp":"2026-02-23 00:20:13.919"}
+{"level":"info","message":"Puppeteer MCP Server closing","service":"mcp-puppeteer","timestamp":"2026-02-23 00:21:36.543"}